Connectome Explanation Benchmark (CXB)
A benchmark that plants a known connectivity effect into real ABIDE I fMRI connectomes (848 subjects, 19 hospitals), so model explanations can be scored against an exact ground truth.
- Showed that a train-only scanner shortcut raises the scanner share of the top explanation edges by up to 0.43, while test accuracy falls by only 0.03 to 0.07.
- Proposed counterfactual site training (CF-Site): +0.15 AUPRC in disease recovery over plain training, matching the best ComBat variant without harmonizing new-site data.
- PyTorch Geometric
- Captum
- nilearn
- scikit-learn